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SRX6225345: Trace experiment for center RGP, GENOMIC, species ORYZA SATIVA (JAPONICA CULTIVAR-GROUP) P0557-9-A05
1 CAPILLARY (AB 310 Genetic Analyzer) run: 2,176 spots, 1.9M bases, 41Mb downloads

Design: N/A
Submitted by: RGP
Study: International Rice Genome Sequencing Project
show Abstracthide Abstract
IRGSP is a <a href="http://rgp.dna.affrc.go.jp/IRGSP/members.html">consortium</a> of publicly funded members from ten different countries that sequenced the genome of <b><i>O. sativa</b></i> ssp. <b><i> japonica</b></i>. The project began in 1998 and the first high-quality map-based draft sequence was released in December 2002. The consortium members are Japan, USA, China, Taiwan, Korea, India, Thailand, France, Brazil, and the United Kingdom. The sequencing strategy was to organize BAC clones into contigs by FPC. These contigs were placed on a high-density genetic map. From this a minimum tiling path was chosen and the nucleotide sequence of these BACs was determined. PAC clones were used to fill in some gaps. The final sequence represents finished quality sequence that covers 95% of the 389 Mb genome.
Sample:
SAMN12121351 • SRS5013781 • All experiments • All runs
Library:
Name: P0557-9-A05
Instrument: AB 310 Genetic Analyzer
Strategy: CLONE
Source: GENOMIC
Selection: unspecified
Layout: SINGLE
Runs: 1 run, 2,176 spots, 1.9M bases, 41Mb
Run# of Spots# of BasesSizePublished
SRR94583742,1761.9M41Mb2020-12-05

ID:
8280119

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